Interface ActionOrBuilder

public interface ActionOrBuilder extends MessageOrBuilder

Implements

MessageOrBuilder

Methods

containsEnvironment(String key)

public abstract boolean containsEnvironment(String key)

The environment to pass into the container. This environment is merged with values specified in the google.cloud.lifesciences.v2beta.Pipeline message, overwriting any duplicate values. In addition to the values passed here, a few other values are automatically injected into the environment. These cannot be hidden or overwritten. GOOGLE_PIPELINE_FAILED will be set to "1" if the pipeline failed because an action has exited with a non-zero status (and did not have the IGNORE_EXIT_STATUS flag set). This can be used to determine if additional debug or logging actions should execute. GOOGLE_LAST_EXIT_STATUS will be set to the exit status of the last non-background action that executed. This can be used by workflow engine authors to determine whether an individual action has succeeded or failed.

map<string, string> environment = 5;

Parameter
NameDescription
keyString
Returns
TypeDescription
boolean

containsLabels(String key)

public abstract boolean containsLabels(String key)

Labels to associate with the action. This field is provided to assist workflow engine authors in identifying actions (for example, to indicate what sort of action they perform, such as localization or debugging). They are returned in the operation metadata, but are otherwise ignored.

map<string, string> labels = 10;

Parameter
NameDescription
keyString
Returns
TypeDescription
boolean

containsPortMappings(int key)

public abstract boolean containsPortMappings(int key)

A map of containers to host port mappings for this container. If the container already specifies exposed ports, use the PUBLISH_EXPOSED_PORTS flag instead. The host port number must be less than 65536. If it is zero, an unused random port is assigned. To determine the resulting port number, consult the ContainerStartedEvent in the operation metadata.

map<int32, int32> port_mappings = 8;

Parameter
NameDescription
keyint
Returns
TypeDescription
boolean

getAlwaysRun()

public abstract boolean getAlwaysRun()

By default, after an action fails, no further actions are run. This flag indicates that this action must be run even if the pipeline has already failed. This is useful for actions that copy output files off of the VM or for debugging. Note that no actions will be run if image prefetching fails.

bool always_run = 15;

Returns
TypeDescription
boolean

The alwaysRun.

getBlockExternalNetwork()

public abstract boolean getBlockExternalNetwork()

Prevents the container from accessing the external network.

bool block_external_network = 20;

Returns
TypeDescription
boolean

The blockExternalNetwork.

getCommands(int index)

public abstract String getCommands(int index)

If specified, overrides the CMD specified in the container. If the container also has an ENTRYPOINT the values are used as entrypoint arguments. Otherwise, they are used as a command and arguments to run inside the container.

repeated string commands = 3;

Parameter
NameDescription
indexint

The index of the element to return.

Returns
TypeDescription
String

The commands at the given index.

getCommandsBytes(int index)

public abstract ByteString getCommandsBytes(int index)

If specified, overrides the CMD specified in the container. If the container also has an ENTRYPOINT the values are used as entrypoint arguments. Otherwise, they are used as a command and arguments to run inside the container.

repeated string commands = 3;

Parameter
NameDescription
indexint

The index of the value to return.

Returns
TypeDescription
ByteString

The bytes of the commands at the given index.

getCommandsCount()

public abstract int getCommandsCount()

If specified, overrides the CMD specified in the container. If the container also has an ENTRYPOINT the values are used as entrypoint arguments. Otherwise, they are used as a command and arguments to run inside the container.

repeated string commands = 3;

Returns
TypeDescription
int

The count of commands.

getCommandsList()

public abstract List<String> getCommandsList()

If specified, overrides the CMD specified in the container. If the container also has an ENTRYPOINT the values are used as entrypoint arguments. Otherwise, they are used as a command and arguments to run inside the container.

repeated string commands = 3;

Returns
TypeDescription
List<String>

A list containing the commands.

getContainerName()

public abstract String getContainerName()

An optional name for the container. The container hostname will be set to this name, making it useful for inter-container communication. The name must contain only upper and lowercase alphanumeric characters and hyphens and cannot start with a hyphen.

string container_name = 1;

Returns
TypeDescription
String

The containerName.

getContainerNameBytes()

public abstract ByteString getContainerNameBytes()

An optional name for the container. The container hostname will be set to this name, making it useful for inter-container communication. The name must contain only upper and lowercase alphanumeric characters and hyphens and cannot start with a hyphen.

string container_name = 1;

Returns
TypeDescription
ByteString

The bytes for containerName.

getCredentials()

public abstract Secret getCredentials()

If the specified image is hosted on a private registry other than Google Container Registry, the credentials required to pull the image must be specified here as an encrypted secret. The secret must decrypt to a JSON-encoded dictionary containing both username and password keys.

.google.cloud.lifesciences.v2beta.Secret credentials = 11;

Returns
TypeDescription
Secret

The credentials.

getCredentialsOrBuilder()

public abstract SecretOrBuilder getCredentialsOrBuilder()

If the specified image is hosted on a private registry other than Google Container Registry, the credentials required to pull the image must be specified here as an encrypted secret. The secret must decrypt to a JSON-encoded dictionary containing both username and password keys.

.google.cloud.lifesciences.v2beta.Secret credentials = 11;

Returns
TypeDescription
SecretOrBuilder

getDisableImagePrefetch()

public abstract boolean getDisableImagePrefetch()

All container images are typically downloaded before any actions are executed. This helps prevent typos in URIs or issues like lack of disk space from wasting large amounts of compute resources. If set, this flag prevents the worker from downloading the image until just before the action is executed.

bool disable_image_prefetch = 18;

Returns
TypeDescription
boolean

The disableImagePrefetch.

getDisableStandardErrorCapture()

public abstract boolean getDisableStandardErrorCapture()

A small portion of the container's standard error stream is typically captured and returned inside the ContainerStoppedEvent. Setting this flag disables this functionality.

bool disable_standard_error_capture = 19;

Returns
TypeDescription
boolean

The disableStandardErrorCapture.

getEnableFuse()

public abstract boolean getEnableFuse()

Enable access to the FUSE device for this action. Filesystems can then be mounted into disks shared with other actions. The other actions do not need the enable_fuse flag to access the mounted filesystem. This has the effect of causing the container to be executed with CAP_SYS_ADMIN and exposes /dev/fuse to the container, so use it only for containers you trust.

bool enable_fuse = 16;

Returns
TypeDescription
boolean

The enableFuse.

getEntrypoint()

public abstract String getEntrypoint()

If specified, overrides the ENTRYPOINT specified in the container.

string entrypoint = 4;

Returns
TypeDescription
String

The entrypoint.

getEntrypointBytes()

public abstract ByteString getEntrypointBytes()

If specified, overrides the ENTRYPOINT specified in the container.

string entrypoint = 4;

Returns
TypeDescription
ByteString

The bytes for entrypoint.

getEnvironment()

public abstract Map<String,String> getEnvironment()

Use #getEnvironmentMap() instead.

Returns
TypeDescription
Map<String,String>

getEnvironmentCount()

public abstract int getEnvironmentCount()

The environment to pass into the container. This environment is merged with values specified in the google.cloud.lifesciences.v2beta.Pipeline message, overwriting any duplicate values. In addition to the values passed here, a few other values are automatically injected into the environment. These cannot be hidden or overwritten. GOOGLE_PIPELINE_FAILED will be set to "1" if the pipeline failed because an action has exited with a non-zero status (and did not have the IGNORE_EXIT_STATUS flag set). This can be used to determine if additional debug or logging actions should execute. GOOGLE_LAST_EXIT_STATUS will be set to the exit status of the last non-background action that executed. This can be used by workflow engine authors to determine whether an individual action has succeeded or failed.

map<string, string> environment = 5;

Returns
TypeDescription
int

getEnvironmentMap()

public abstract Map<String,String> getEnvironmentMap()

The environment to pass into the container. This environment is merged with values specified in the google.cloud.lifesciences.v2beta.Pipeline message, overwriting any duplicate values. In addition to the values passed here, a few other values are automatically injected into the environment. These cannot be hidden or overwritten. GOOGLE_PIPELINE_FAILED will be set to "1" if the pipeline failed because an action has exited with a non-zero status (and did not have the IGNORE_EXIT_STATUS flag set). This can be used to determine if additional debug or logging actions should execute. GOOGLE_LAST_EXIT_STATUS will be set to the exit status of the last non-background action that executed. This can be used by workflow engine authors to determine whether an individual action has succeeded or failed.

map<string, string> environment = 5;

Returns
TypeDescription
Map<String,String>

getEnvironmentOrDefault(String key, String defaultValue)

public abstract String getEnvironmentOrDefault(String key, String defaultValue)

The environment to pass into the container. This environment is merged with values specified in the google.cloud.lifesciences.v2beta.Pipeline message, overwriting any duplicate values. In addition to the values passed here, a few other values are automatically injected into the environment. These cannot be hidden or overwritten. GOOGLE_PIPELINE_FAILED will be set to "1" if the pipeline failed because an action has exited with a non-zero status (and did not have the IGNORE_EXIT_STATUS flag set). This can be used to determine if additional debug or logging actions should execute. GOOGLE_LAST_EXIT_STATUS will be set to the exit status of the last non-background action that executed. This can be used by workflow engine authors to determine whether an individual action has succeeded or failed.

map<string, string> environment = 5;

Parameters
NameDescription
keyString
defaultValueString
Returns
TypeDescription
String

getEnvironmentOrThrow(String key)

public abstract String getEnvironmentOrThrow(String key)

The environment to pass into the container. This environment is merged with values specified in the google.cloud.lifesciences.v2beta.Pipeline message, overwriting any duplicate values. In addition to the values passed here, a few other values are automatically injected into the environment. These cannot be hidden or overwritten. GOOGLE_PIPELINE_FAILED will be set to "1" if the pipeline failed because an action has exited with a non-zero status (and did not have the IGNORE_EXIT_STATUS flag set). This can be used to determine if additional debug or logging actions should execute. GOOGLE_LAST_EXIT_STATUS will be set to the exit status of the last non-background action that executed. This can be used by workflow engine authors to determine whether an individual action has succeeded or failed.

map<string, string> environment = 5;

Parameter
NameDescription
keyString
Returns
TypeDescription
String

getIgnoreExitStatus()

public abstract boolean getIgnoreExitStatus()

Normally, a non-zero exit status causes the pipeline to fail. This flag allows execution of other actions to continue instead.

bool ignore_exit_status = 13;

Returns
TypeDescription
boolean

The ignoreExitStatus.

getImageUri()

public abstract String getImageUri()

Required. The URI to pull the container image from. Note that all images referenced by actions in the pipeline are pulled before the first action runs. If multiple actions reference the same image, it is only pulled once, ensuring that the same image is used for all actions in a single pipeline. The image URI can be either a complete host and image specification (e.g., quay.io/biocontainers/samtools), a library and image name (e.g., google/cloud-sdk) or a bare image name ('bash') to pull from the default library. No schema is required in any of these cases. If the specified image is not public, the service account specified for the Virtual Machine must have access to pull the images from GCR, or appropriate credentials must be specified in the google.cloud.lifesciences.v2beta.Action.credentials field.

string image_uri = 2 [(.google.api.field_behavior) = REQUIRED];

Returns
TypeDescription
String

The imageUri.

getImageUriBytes()

public abstract ByteString getImageUriBytes()

Required. The URI to pull the container image from. Note that all images referenced by actions in the pipeline are pulled before the first action runs. If multiple actions reference the same image, it is only pulled once, ensuring that the same image is used for all actions in a single pipeline. The image URI can be either a complete host and image specification (e.g., quay.io/biocontainers/samtools), a library and image name (e.g., google/cloud-sdk) or a bare image name ('bash') to pull from the default library. No schema is required in any of these cases. If the specified image is not public, the service account specified for the Virtual Machine must have access to pull the images from GCR, or appropriate credentials must be specified in the google.cloud.lifesciences.v2beta.Action.credentials field.

string image_uri = 2 [(.google.api.field_behavior) = REQUIRED];

Returns
TypeDescription
ByteString

The bytes for imageUri.

getLabels()

public abstract Map<String,String> getLabels()

Use #getLabelsMap() instead.

Returns
TypeDescription
Map<String,String>

getLabelsCount()

public abstract int getLabelsCount()

Labels to associate with the action. This field is provided to assist workflow engine authors in identifying actions (for example, to indicate what sort of action they perform, such as localization or debugging). They are returned in the operation metadata, but are otherwise ignored.

map<string, string> labels = 10;

Returns
TypeDescription
int

getLabelsMap()

public abstract Map<String,String> getLabelsMap()

Labels to associate with the action. This field is provided to assist workflow engine authors in identifying actions (for example, to indicate what sort of action they perform, such as localization or debugging). They are returned in the operation metadata, but are otherwise ignored.

map<string, string> labels = 10;

Returns
TypeDescription
Map<String,String>

getLabelsOrDefault(String key, String defaultValue)

public abstract String getLabelsOrDefault(String key, String defaultValue)

Labels to associate with the action. This field is provided to assist workflow engine authors in identifying actions (for example, to indicate what sort of action they perform, such as localization or debugging). They are returned in the operation metadata, but are otherwise ignored.

map<string, string> labels = 10;

Parameters
NameDescription
keyString
defaultValueString
Returns
TypeDescription
String

getLabelsOrThrow(String key)

public abstract String getLabelsOrThrow(String key)

Labels to associate with the action. This field is provided to assist workflow engine authors in identifying actions (for example, to indicate what sort of action they perform, such as localization or debugging). They are returned in the operation metadata, but are otherwise ignored.

map<string, string> labels = 10;

Parameter
NameDescription
keyString
Returns
TypeDescription
String

getMounts(int index)

public abstract Mount getMounts(int index)

A list of mounts to make available to the action. In addition to the values specified here, every action has a special virtual disk mounted under /google that contains log files and other operational components. <ul> <li><code>/google/logs</code> All logs written during the pipeline execution.</li> <li><code>/google/logs/output</code> The combined standard output and standard error of all actions run as part of the pipeline execution.</li> <li><code>/google/logs/action/*/stdout</code> The complete contents of each individual action's standard output.</li> <li><code>/google/logs/action/*/stderr</code> The complete contents of each individual action's standard error output.</li> </ul>

repeated .google.cloud.lifesciences.v2beta.Mount mounts = 9;

Parameter
NameDescription
indexint
Returns
TypeDescription
Mount

getMountsCount()

public abstract int getMountsCount()

A list of mounts to make available to the action. In addition to the values specified here, every action has a special virtual disk mounted under /google that contains log files and other operational components. <ul> <li><code>/google/logs</code> All logs written during the pipeline execution.</li> <li><code>/google/logs/output</code> The combined standard output and standard error of all actions run as part of the pipeline execution.</li> <li><code>/google/logs/action/*/stdout</code> The complete contents of each individual action's standard output.</li> <li><code>/google/logs/action/*/stderr</code> The complete contents of each individual action's standard error output.</li> </ul>

repeated .google.cloud.lifesciences.v2beta.Mount mounts = 9;

Returns
TypeDescription
int

getMountsList()

public abstract List<Mount> getMountsList()

A list of mounts to make available to the action. In addition to the values specified here, every action has a special virtual disk mounted under /google that contains log files and other operational components. <ul> <li><code>/google/logs</code> All logs written during the pipeline execution.</li> <li><code>/google/logs/output</code> The combined standard output and standard error of all actions run as part of the pipeline execution.</li> <li><code>/google/logs/action/*/stdout</code> The complete contents of each individual action's standard output.</li> <li><code>/google/logs/action/*/stderr</code> The complete contents of each individual action's standard error output.</li> </ul>

repeated .google.cloud.lifesciences.v2beta.Mount mounts = 9;

Returns
TypeDescription
List<Mount>

getMountsOrBuilder(int index)

public abstract MountOrBuilder getMountsOrBuilder(int index)

A list of mounts to make available to the action. In addition to the values specified here, every action has a special virtual disk mounted under /google that contains log files and other operational components. <ul> <li><code>/google/logs</code> All logs written during the pipeline execution.</li> <li><code>/google/logs/output</code> The combined standard output and standard error of all actions run as part of the pipeline execution.</li> <li><code>/google/logs/action/*/stdout</code> The complete contents of each individual action's standard output.</li> <li><code>/google/logs/action/*/stderr</code> The complete contents of each individual action's standard error output.</li> </ul>

repeated .google.cloud.lifesciences.v2beta.Mount mounts = 9;

Parameter
NameDescription
indexint
Returns
TypeDescription
MountOrBuilder

getMountsOrBuilderList()

public abstract List<? extends MountOrBuilder> getMountsOrBuilderList()

A list of mounts to make available to the action. In addition to the values specified here, every action has a special virtual disk mounted under /google that contains log files and other operational components. <ul> <li><code>/google/logs</code> All logs written during the pipeline execution.</li> <li><code>/google/logs/output</code> The combined standard output and standard error of all actions run as part of the pipeline execution.</li> <li><code>/google/logs/action/*/stdout</code> The complete contents of each individual action's standard output.</li> <li><code>/google/logs/action/*/stderr</code> The complete contents of each individual action's standard error output.</li> </ul>

repeated .google.cloud.lifesciences.v2beta.Mount mounts = 9;

Returns
TypeDescription
List<? extends com.google.cloud.lifesciences.v2beta.MountOrBuilder>

getPidNamespace()

public abstract String getPidNamespace()

An optional identifier for a PID namespace to run the action inside. Multiple actions should use the same string to share a namespace. If unspecified, a separate isolated namespace is used.

string pid_namespace = 6;

Returns
TypeDescription
String

The pidNamespace.

getPidNamespaceBytes()

public abstract ByteString getPidNamespaceBytes()

An optional identifier for a PID namespace to run the action inside. Multiple actions should use the same string to share a namespace. If unspecified, a separate isolated namespace is used.

string pid_namespace = 6;

Returns
TypeDescription
ByteString

The bytes for pidNamespace.

getPortMappings()

public abstract Map<Integer,Integer> getPortMappings()

Use #getPortMappingsMap() instead.

Returns
TypeDescription
Map<java.lang.Integer,java.lang.Integer>

getPortMappingsCount()

public abstract int getPortMappingsCount()

A map of containers to host port mappings for this container. If the container already specifies exposed ports, use the PUBLISH_EXPOSED_PORTS flag instead. The host port number must be less than 65536. If it is zero, an unused random port is assigned. To determine the resulting port number, consult the ContainerStartedEvent in the operation metadata.

map<int32, int32> port_mappings = 8;

Returns
TypeDescription
int

getPortMappingsMap()

public abstract Map<Integer,Integer> getPortMappingsMap()

A map of containers to host port mappings for this container. If the container already specifies exposed ports, use the PUBLISH_EXPOSED_PORTS flag instead. The host port number must be less than 65536. If it is zero, an unused random port is assigned. To determine the resulting port number, consult the ContainerStartedEvent in the operation metadata.

map<int32, int32> port_mappings = 8;

Returns
TypeDescription
Map<java.lang.Integer,java.lang.Integer>

getPortMappingsOrDefault(int key, int defaultValue)

public abstract int getPortMappingsOrDefault(int key, int defaultValue)

A map of containers to host port mappings for this container. If the container already specifies exposed ports, use the PUBLISH_EXPOSED_PORTS flag instead. The host port number must be less than 65536. If it is zero, an unused random port is assigned. To determine the resulting port number, consult the ContainerStartedEvent in the operation metadata.

map<int32, int32> port_mappings = 8;

Parameters
NameDescription
keyint
defaultValueint
Returns
TypeDescription
int

getPortMappingsOrThrow(int key)

public abstract int getPortMappingsOrThrow(int key)

A map of containers to host port mappings for this container. If the container already specifies exposed ports, use the PUBLISH_EXPOSED_PORTS flag instead. The host port number must be less than 65536. If it is zero, an unused random port is assigned. To determine the resulting port number, consult the ContainerStartedEvent in the operation metadata.

map<int32, int32> port_mappings = 8;

Parameter
NameDescription
keyint
Returns
TypeDescription
int

getPublishExposedPorts()

public abstract boolean getPublishExposedPorts()

Exposes all ports specified by EXPOSE statements in the container. To discover the host side port numbers, consult the ACTION_STARTED event in the operation metadata.

bool publish_exposed_ports = 17;

Returns
TypeDescription
boolean

The publishExposedPorts.

getRunInBackground()

public abstract boolean getRunInBackground()

This flag allows an action to continue running in the background while executing subsequent actions. This is useful to provide services to other actions (or to provide debugging support tools like SSH servers).

bool run_in_background = 14;

Returns
TypeDescription
boolean

The runInBackground.

getTimeout()

public abstract Duration getTimeout()

The maximum amount of time to give the action to complete. If the action fails to complete before the timeout, it will be terminated and the exit status will be non-zero. The pipeline will continue or terminate based on the rules defined by the ALWAYS_RUN and IGNORE_EXIT_STATUS flags.

.google.protobuf.Duration timeout = 12;

Returns
TypeDescription
Duration

The timeout.

getTimeoutOrBuilder()

public abstract DurationOrBuilder getTimeoutOrBuilder()

The maximum amount of time to give the action to complete. If the action fails to complete before the timeout, it will be terminated and the exit status will be non-zero. The pipeline will continue or terminate based on the rules defined by the ALWAYS_RUN and IGNORE_EXIT_STATUS flags.

.google.protobuf.Duration timeout = 12;

Returns
TypeDescription
DurationOrBuilder

hasCredentials()

public abstract boolean hasCredentials()

If the specified image is hosted on a private registry other than Google Container Registry, the credentials required to pull the image must be specified here as an encrypted secret. The secret must decrypt to a JSON-encoded dictionary containing both username and password keys.

.google.cloud.lifesciences.v2beta.Secret credentials = 11;

Returns
TypeDescription
boolean

Whether the credentials field is set.

hasTimeout()

public abstract boolean hasTimeout()

The maximum amount of time to give the action to complete. If the action fails to complete before the timeout, it will be terminated and the exit status will be non-zero. The pipeline will continue or terminate based on the rules defined by the ALWAYS_RUN and IGNORE_EXIT_STATUS flags.

.google.protobuf.Duration timeout = 12;

Returns
TypeDescription
boolean

Whether the timeout field is set.