Mettre à jour une ressource FHIR

Mettre à jour une ressource FHIR.

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Pour obtenir une documentation détaillée incluant cet exemple de code, consultez les articles suivants :

Exemple de code

Go

Avant d'essayer cet exemple, suivez les instructions de configuration de Go dans le guide de démarrage rapide de l'API Cloud Healthcare à l'aide des bibliothèques clientes. Pour en savoir plus, consultez la documentation de référence de l'API Go de l'API Cloud Healthcare.

Pour vous authentifier auprès de l'API Cloud Healthcare, configurez les Identifiants par défaut de l'application. Pour en savoir plus, consultez Configurer l'authentification pour un environnement de développement local.

import (
	"bytes"
	"context"
	"encoding/json"
	"fmt"
	"io"
	"io/ioutil"

	healthcare "google.golang.org/api/healthcare/v1"
)

// updateFHIRResource updates an FHIR resource to be active or not.
func updateFHIRResource(w io.Writer, projectID, location, datasetID, fhirStoreID, resourceType, fhirResourceID string, active bool) error {
	ctx := context.Background()

	healthcareService, err := healthcare.NewService(ctx)
	if err != nil {
		return fmt.Errorf("healthcare.NewService: %w", err)
	}

	fhirService := healthcareService.Projects.Locations.Datasets.FhirStores.Fhir

	// The following payload works with a Patient resource and is not
	// intended to work with other types of FHIR resources. If necessary,
	// supply a new payload with data that corresponds to the FHIR resource
	// you are updating.
	payload := map[string]interface{}{
		"resourceType": resourceType,
		"id":           fhirResourceID,
		"active":       active,
	}
	jsonPayload, err := json.Marshal(payload)
	if err != nil {
		return fmt.Errorf("json.Encode: %w", err)
	}

	name := fmt.Sprintf("projects/%s/locations/%s/datasets/%s/fhirStores/%s/fhir/%s/%s", projectID, location, datasetID, fhirStoreID, resourceType, fhirResourceID)

	call := fhirService.Update(name, bytes.NewReader(jsonPayload))
	call.Header().Set("Content-Type", "application/fhir+json;charset=utf-8")
	resp, err := call.Do()
	if err != nil {
		return fmt.Errorf("Update: %w", err)
	}
	defer resp.Body.Close()

	respBytes, err := ioutil.ReadAll(resp.Body)
	if err != nil {
		return fmt.Errorf("could not read response: %w", err)
	}

	if resp.StatusCode > 299 {
		return fmt.Errorf("Update: status %d %s: %s", resp.StatusCode, resp.Status, respBytes)
	}
	fmt.Fprintf(w, "%s", respBytes)

	return nil
}

Java

Avant d'essayer cet exemple, suivez les instructions de configuration de Java dans le guide de démarrage rapide de l'API Cloud Healthcare à l'aide des bibliothèques clientes. Pour en savoir plus, consultez la documentation de référence de l'API Java de l'API Cloud Healthcare.

Pour vous authentifier auprès de l'API Cloud Healthcare, configurez les Identifiants par défaut de l'application. Pour en savoir plus, consultez Configurer l'authentification pour un environnement de développement local.


import com.google.api.client.http.HttpRequestInitializer;
import com.google.api.client.http.javanet.NetHttpTransport;
import com.google.api.client.json.JsonFactory;
import com.google.api.client.json.gson.GsonFactory;
import com.google.api.services.healthcare.v1.CloudHealthcare;
import com.google.api.services.healthcare.v1.CloudHealthcareScopes;
import com.google.auth.http.HttpCredentialsAdapter;
import com.google.auth.oauth2.GoogleCredentials;
import java.io.IOException;
import java.net.URISyntaxException;
import java.util.Collections;
import org.apache.http.HttpEntity;
import org.apache.http.HttpResponse;
import org.apache.http.HttpStatus;
import org.apache.http.client.HttpClient;
import org.apache.http.client.methods.HttpUriRequest;
import org.apache.http.client.methods.RequestBuilder;
import org.apache.http.client.utils.URIBuilder;
import org.apache.http.entity.StringEntity;
import org.apache.http.impl.client.HttpClients;

public class FhirResourceUpdate {
  private static final String FHIR_NAME =
      "projects/%s/locations/%s/datasets/%s/fhirStores/%s/fhir/%s/%s";
  private static final JsonFactory JSON_FACTORY = new GsonFactory();
  private static final NetHttpTransport HTTP_TRANSPORT = new NetHttpTransport();

  public static void fhirResourceUpdate(String resourceName, String data)
      throws IOException, URISyntaxException {
    // String resourceName =
    //    String.format(
    //        FHIR_NAME, "project-id", "region-id", "dataset-id", "store-id", "resource-type",
    // "resource-id");
    // The following data works with a Patient resource and is not intended to work with
    // other types of FHIR resources. If necessary, supply new values for data that
    // correspond to the FHIR resource you are patching.
    // String data = "[{\"op\": \"replace\", \"path\": \"/active\", \"value\": false}]";

    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();

    HttpClient httpClient = HttpClients.createDefault();
    String uri = String.format("%sv1/%s", client.getRootUrl(), resourceName);
    URIBuilder uriBuilder = new URIBuilder(uri).setParameter("access_token", getAccessToken());
    StringEntity requestEntity = new StringEntity(data);

    HttpUriRequest request =
        RequestBuilder.put(uriBuilder.build())
            .setEntity(requestEntity)
            .addHeader("Content-Type", "application/fhir+json;charset=utf-8")
            .addHeader("Accept-Charset", "utf-8")
            .addHeader("Accept", "application/fhir+json; charset=utf-8")
            .build();

    // Execute the request and process the results.
    HttpResponse response = httpClient.execute(request);
    HttpEntity responseEntity = response.getEntity();
    if (response.getStatusLine().getStatusCode() != HttpStatus.SC_OK) {
      System.err.print(
          String.format(
              "Exception updating FHIR resource: %s\n", response.getStatusLine().toString()));
      responseEntity.writeTo(System.err);
      throw new RuntimeException();
    }
    System.out.println("FHIR resource updated: ");
    responseEntity.writeTo(System.out);
  }

  private static CloudHealthcare createClient() throws IOException {
    // Use Application Default Credentials (ADC) to authenticate the requests
    // For more information see https://cloud.google.com/docs/authentication/production
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    // Create a HttpRequestInitializer, which will provide a baseline configuration to all requests.
    HttpRequestInitializer requestInitializer =
        request -> {
          new HttpCredentialsAdapter(credential).initialize(request);
          request.setConnectTimeout(60000); // 1 minute connect timeout
          request.setReadTimeout(60000); // 1 minute read timeout
        };

    // Build the client for interacting with the service.
    return new CloudHealthcare.Builder(HTTP_TRANSPORT, JSON_FACTORY, requestInitializer)
        .setApplicationName("your-application-name")
        .build();
  }

  private static String getAccessToken() throws IOException {
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    return credential.refreshAccessToken().getTokenValue();
  }
}

Node.js

Avant d'essayer cet exemple, suivez les instructions de configuration de Node.js dans le guide de démarrage rapide de l'API Cloud Healthcare à l'aide des bibliothèques clientes. Pour en savoir plus, consultez la documentation de référence de l'API Node.js de l'API Cloud Healthcare.

Pour vous authentifier auprès de l'API Cloud Healthcare, configurez les Identifiants par défaut de l'application. Pour en savoir plus, consultez Configurer l'authentification pour un environnement de développement local.

const google = require('@googleapis/healthcare');
const healthcare = google.healthcare({
  version: 'v1',
  auth: new google.auth.GoogleAuth({
    scopes: ['https://www.googleapis.com/auth/cloud-platform'],
  }),
  headers: {'Content-Type': 'application/fhir+json'},
});

const updateFhirResource = async () => {
  // TODO(developer): uncomment these lines before running the sample
  // const cloudRegion = 'us-central1';
  // const projectId = 'adjective-noun-123';
  // const datasetId = 'my-dataset';
  // const fhirStoreId = 'my-fhir-store';
  // const resourceType = 'Patient';
  // const resourceId = '16e8a860-33b3-49be-9b03-de979feed14a';
  const name = `projects/${projectId}/locations/${cloudRegion}/datasets/${datasetId}/fhirStores/${fhirStoreId}/fhir/${resourceType}/${resourceId}`;
  // The following body works with a Patient resource and is not intended
  // to work with other types of FHIR resources. If necessary, supply a new
  // body with data that corresponds to the FHIR resource you are updating.
  const body = {resourceType: resourceType, id: resourceId, active: true};
  const request = {name, requestBody: body};

  const resource =
    await healthcare.projects.locations.datasets.fhirStores.fhir.update(
      request
    );
  console.log(`Updated ${resourceType} resource:\n`, resource.data);
};

updateFhirResource();

Python

Avant d'essayer cet exemple, suivez les instructions de configuration de Python dans le guide de démarrage rapide de l'API Cloud Healthcare à l'aide des bibliothèques clientes. Pour en savoir plus, consultez la documentation de référence de l'API Python de l'API Cloud Healthcare.

Pour vous authentifier auprès de l'API Cloud Healthcare, configurez les Identifiants par défaut de l'application. Pour en savoir plus, consultez Configurer l'authentification pour un environnement de développement local.

# Imports the types Dict and Any for runtime type hints.
from typing import Any, Dict  # noqa: E402

def update_resource(
    project_id: str,
    location: str,
    dataset_id: str,
    fhir_store_id: str,
    resource_type: str,
    resource_id: str,
) -> Dict[str, Any]:
    """Updates the entire contents of a FHIR resource.

    Creates a new current version if the resource already exists, or creates
    a new resource with an initial version if no resource already exists with
    the provided ID.

    See
    https://github.com/GoogleCloudPlatform/python-docs-samples/tree/main/healthcare/api-client/v1/fhir
    before running the sample.
    See
    https://googleapis.github.io/google-api-python-client/docs/dyn/healthcare_v1.projects.locations.datasets.fhirStores.fhir.html#update
    for the Python API reference.

    Args:
      project_id: The project ID or project number of the Cloud project you want
        to use.
      location: The name of the parent dataset's location.
      dataset_id: The name of the parent dataset.
      fhir_store_id: The name of the FHIR store.
      resource_type: The type of the FHIR resource.
      resource_id: The "logical id" of the resource. The ID is assigned by the
        server.

    Returns:
      A dict representing the updated FHIR resource.
    """
    # Imports the Google API Discovery Service.
    from googleapiclient import discovery

    api_version = "v1"
    service_name = "healthcare"

    # Returns an authorized API client by discovering the Healthcare API
    # and using GOOGLE_APPLICATION_CREDENTIALS environment variable.
    client = discovery.build(service_name, api_version)

    # TODO(developer): Uncomment these lines and replace with your values.
    # project_id = 'my-project'
    # location = 'us-central1'
    # dataset_id = 'my-dataset'
    # fhir_store_id = 'my-fhir-store'
    # resource_type = 'Patient'
    # resource_id = 'b682d-0e-4843-a4a9-78c9ac64'
    fhir_store_parent = (
        f"projects/{project_id}/locations/{location}/datasets/{dataset_id}"
    )
    fhir_resource_path = f"{fhir_store_parent}/fhirStores/{fhir_store_id}/fhir/{resource_type}/{resource_id}"

    # The following sample body works with a Patient resource and isn't guaranteed
    # to work with other types of FHIR resources. If necessary,
    # supply a new body with data that corresponds to the resource you
    # are updating.
    patient_body = {
        "resourceType": resource_type,
        "active": True,
        "id": resource_id,
    }

    request = (
        client.projects()
        .locations()
        .datasets()
        .fhirStores()
        .fhir()
        .update(name=fhir_resource_path, body=patient_body)
    )
    # Sets required application/fhir+json header on the googleapiclient.http.HttpRequest.
    request.headers["content-type"] = "application/fhir+json;charset=utf-8"
    response = request.execute()

    print(
        f"Updated {resource_type} resource with ID {resource_id}:\n"
        f" {json.dumps(response, indent=2)}"
    )

    return response

Étapes suivantes

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