Use DeepVariant, a genomics variant caller that uses deep neural networks, to call genetic variants in germline genomes.
Running GATK Best Practices
Run the GATK Best Practices pipeline from The Broad Institute of MIT and Harvard on one or more pipelines.
Use Nextflow to run a proof of concept RNA-Seq pipeline.
Running Sentieon DNAseq
Run Sentieon DNAseq as a Google Cloud Platform pipeline.
Use dsub to submit and run batch jobs in the cloud.