API migration
Analyzing variants with BigQuery
Running the Variant Transforms tool
-
Copying and storing genomic variants
Copy and store raw VCF files in Cloud Storage.
-
Storing and loading genomic variants
Load and transform VCF files into BigQuery for large-scale analysis.
-
Handling large inputs
Learn how to improve performance and reduce costs when loading large numbers of files.
-
Validating VCF files with the preprocessor tool
Use the Variant Transforms tool VCF files preprocessor to validate VCF files.
-
Parsing and annotating VCF files
Use the annotation support available in the Variant Transforms tool.
-
Understanding the BigQuery variants table schema
Use the Cloud Life Sciences API to export variants to BigQuery.
-
Flattening the BigQuery variants table
Flatten the BigQuery variants table to remove repeated records.
-
Troubleshooting the variant transforms tool
Get solutions to common problems.